BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026B08LP1|AL428498
(885 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1682 1730 0.0
>3x_Contig1682
Length = 16889
Score = 1730 bits (870), Expect = 0.0
Identities = 881/886 (99%), Gaps = 1/886 (0%)
Strand = Plus / Minus
Query: 1 gatcatggatctgtctgttgttccaacatcgacgaaagtcttatcaacagcgttaatgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15849 gatcatggatctgtctgttgttccaacatcgacgaaagtcttatcaacagcgttaatgtt 15790
Query: 61 cttgacaccttcatctagggatgcttgagttctgaacacagaaacatccttttgcatggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15789 cttgacaccttcatctagggatgcttgagttctgaacacagaaacatccttttgcatggt 15730
Query: 121 cttttgcatggccaatctgatatcagcggttggtctgtgaccggtagcatttctcaactt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15729 cttttgcatggccaatctgatatcagcggttggtctgtgaccggtagcatttctcaactt 15670
Query: 181 gtccaagttagcgatagattccttacccaaatcagctggcaatggcttatgaggtaaacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15669 gtccaagttagcgatagattccttacccaaatcagctggcaatggcttatgaggtaaacc 15610
Query: 241 tggttgcmaagtgtcagcgatagtatgagcgacas-acgaccgaacacgaccaaatctaa 299
||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 15609 tggttgcaaagtgtcagcgatagtatgagcgacagcacgaccgaacacgaccaaatctaa 15550
Query: 300 caaggaattagcacccaatctgttagcaccgtgaacagagacacaagctgcttcaccaca 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15549 caaggaattagcacccaatctgttagcaccgtgaacagagacacaagctgcttcaccaca 15490
Query: 360 ggcaagtagacctgggatgagaacatcttcaccggtttcttcatcgatagtcaaagcttc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15489 ggcaagtagacctgggatgagaacatcttcaccggtttcttcatcgatagtcaaagcttc 15430
Query: 420 accgttccacttagttggaataccacccatgttatwatggacagtaggtaagataggaat 479
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 15429 accgttccacttagttggaataccacccatgttataatggacagtaggtaagataggaat 15370
Query: 480 tggttccttagtgacatcgacaccggcgaaaatggctgcagtttcagagatacctggcaa 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15369 tggttccttagtgacatcgacaccggcgaaaatggctgcagtttcagagatacctggcaa 15310
Query: 540 acgttcatgaagcacagaaggtggcaaatggttcaattgcaagaacatgtgatccttttc 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15309 acgttcatgaagcacagaaggtggcaaatggttcaattgcaagaacatgtgatccttttc 15250
Query: 600 tggaccaacacctctaccttctctgatttccatggtgatggcacgagaaacaacgtctct 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15249 tggaccaacacctctaccttctctgatttccatggtgatggcacgagaaacaacgtctct 15190
Query: 660 acaagctaaatccttagcagttggagcataacgttccatgaaacgttcaccttcagagtt 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15189 acaagctaaatccttagcagttggagcataacgttccatgaaacgttcaccttcagagtt 15130
Query: 720 aaccaagaaaccaccctcaccacgagcaccttcagtgatcaaacaaccggaaccgtagat 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15129 aaccaagaaaccaccctcaccacgagcaccttcagtgatcaaacaaccggaaccgtagat 15070
Query: 780 accggaaggatggaattgaataaattccaaatcttgcaatgggraaccagcacgagaaac 839
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 15069 accggaaggatggaattgaataaattccaaatcttgcaatgggaaaccagcacgagaaac 15010
Query: 840 catagcataaccatcacctgtacaagtatgagcagatgtacaagag 885
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15009 catagcataaccatcacctgtacaagtatgagcagatgtacaagag 14964
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5440
Number of Sequences: 1807
Number of extensions: 5440
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 1
length of query: 885
length of database: 10,358,551
effective HSP length: 16
effective length of query: 869
effective length of database: 10,329,639
effective search space: 8976456291
effective search space used: 8976456291
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)